MULTIFACTORIAL COMPARATIVE-STUDY OF SPATIAL POINT PATTERN-ANALYSIS METHODS

Citation
F. Wallet et C. Dussert, MULTIFACTORIAL COMPARATIVE-STUDY OF SPATIAL POINT PATTERN-ANALYSIS METHODS, Journal of theoretical biology, 187(3), 1997, pp. 437-447
Citations number
30
Categorie Soggetti
Biology Miscellaneous
ISSN journal
00225193
Volume
187
Issue
3
Year of publication
1997
Pages
437 - 447
Database
ISI
SICI code
0022-5193(1997)187:3<437:MCOSPP>2.0.ZU;2-#
Abstract
A way of studying cooperative behaviour of biological entities (protei ns, cells, etc.) is by using topographical analysis: the quantificatio n of the spatial patterns formed by the entities considered as points. Five methods of topographical analysis were compared in terms of disc riminant power, stability of parameters, methodological bias and algor ithms. We tested five methods (nearest neighbour distribution, radial distribution, Voronoi paving, quadrat count, minimal spanning tree gra ph) which generated nine parameters on four simulated models (random p oint process, hardcore model and two cluster models) and on experiment al cellular models. The method which offers the best discrimination po wer and stability seems to be the minimal spanning tree graph edge len gth distribution. (C) 1997 Academic Press Limited.