In vivo propagation of [PSI+], an aggregation-prone prion isoform of the ye
ast release factor Sup35 (eRF3), has previously been shown to require inter
mediate levels of the chaperone protein Hsp104, Here we perform a detailed
study on the mechanism of prion loss after Hsp104 inactivation. Complete or
partial inactivation of Hsp104 mas achieved by the following approaches: d
eleting the HSP104 gene; modifying the HSP104 promoter that results in low
level of its expression; and overexpressing the dominant-negative ATPase-in
active mutant HSP104 allele. In contrast to guanidine-HCI, an agent blockin
g prion proliferation, Hsp104 inactivation induced relatively rapid loss of
[PSI+] and another candidate yeast prion, [PIN+]. Thus, the previously hyp
othesized mechanism of prion dilution in cell divisions due to the blocking
of prion proliferation is not sufficient to explain the effect of Hsp104 i
nactivation. The [PSI+] response to increased levels of another chaperone,
Hsp70-Ssa, depends on whether the Hsp104 activity is increased or decreased
. A decrease of Hsp104 levels or activity is accompanied by a decrease in t
he number of Sup35(PSI+) aggregates and an increase in their size. This eve
ntually leads to accumulation of huge agglomerates, apparently possessing r
educed prion forming capability and representing dead ends of the prion rep
lication cycle. Thus, our data confirm that the primary function of Hsp104
in prion propagation is to disassemble prion aggregates and generate the sm
all prion seeds that initiate new rounds of prion propagation (possibly ass
isted by Hsp70-Ssa).