A systematic study of the membrane-associated regions in the plasma me
mbrane Ca2+ pump of erythrocytes has been performed by hydrophobic pho
tolabeling. Purified Ca2+ pump was labeled with trifluoromethyl)-3-(m-
[I-125]iodophenyl)-diazirine ([I-125]TID), a generic photoactivatable
hydrophobic probe. These results were compared with the enzyme labeled
with a strictly membrane-bound probe, [H-3]bis-phosphatidylethanolami
ne (trifluoromethyl) phenyldiazirine. A significant light-dependent la
beling of an M-r 135,000-140,000 peptide, corresponding to the full Ca
2+ pump, was observed with both probes. After proteolysis of the pump
labeled with each probe rind isolation of fragments by SDS-PAGE, a com
mon pattern of labeled peptides was observed. Similarly, labeling of t
he Ca2+ pump with [ I-125]TID, either in isolated red blood cell membr
anes or after the enzyme was purified, yields a similar pattern of lab
eled peptides, Taken together, these results validate the use of eithe
r probe to study the lipid interface of the membrane-embedded region o
f this protein, and sustain the notion that the conformation of the pu
mp is maintained throughout the procedures of solubilization, affinity
purification, and reconstitution into proteoliposomes. In this work,
we put special emphasis on a detailed analysis of the N-terminal domai
n of the Ca2+ pump. A labeled peptide of M-r 40,000 belonging to this
region was purified and further digested with Vs protease, The specifi
c incorporation of [I-125]TID to proteolytic fragments pertaining to t
he amino-terminal region indicates the existence of two transmembrane
stretches in this domain, A theoretical analysis based on the amino ac
id sequence 1-322 predicts two segments with high probability of membr
ane insertion, in agreement with the experimental data. Each segment s
hows a periodicity pattern of hydrophobicity and variability compatibl
e with alpha-helical structure, These results strongly suggest the exi
stence of a transmembrane helical hairpin motif near the N-terminus of
the Ca2+ pump.