A yeast three-hybrid system was employed to analyze interactions in vivo be
tween H1 RNA, the RNA subunit of human nuclear RNase P, and eight of the pr
otein subunits of the enzyme. The genetic analysis indicates that subunits
Rpp21, Rpp29, Rpp30, and Rpp38 interact directly with H1 RNA. The results o
f direct UV crosslinking studies of the purified RNase P holoenzyme confirm
the results of the three-hybrid assay.