Kainic acid (KA), a potent neurotoxin and excitatory amino acid, leads to d
erangements and modulation of brain proteins. No global brain protein expre
ssion pattern induced by KA-treatment has been reported yet. We therefore s
tudied the effect of systemic KA administration on the levels of brain prot
eins. Rats were injected placebo or KA intraperitoneally and brain was take
n after one week. The mitochondrial and cytosolic fractions of the brain pr
oteins were analyzed by proteomics technologies and the levels of selected
proteins were quantified using specific software. Heat shock protein HSP 27
was exclusively detected in brains of animals treated with KA, whereas the
glucose regulated protein GRP 78 was downregulated. The levels of neurofil
aments and alpha-internexin were significantly decreased and a fragment of
tubulin alpha-1 chain was manifold increased in KA-brains. The mitochondria
l enzymes dihydrolipoamide dehydrogenase, ATP synthase beta chain and isoci
trate dehydrogenase were reduced and pyruvate kinase Mi was increased follo
wing KA treatment. We conclude that the concomitant determination of the br
ain proteins indicates altered regulation of heat shock proteins, neuronal
death, cytoskeletal disruption, and mitochondrial derangement by systemic K
A administration. This report confirms and extends previous studies on the
effect of KA on the expression of brain proteins and suggests that our anal
ytical system can serve as a model for neurotoxicological, neurobiological,
and neuropathological proteome studies.