Automatic identification of metaphase spreads and nuclei using neural networks

Citation
Fa. Cosio et al., Automatic identification of metaphase spreads and nuclei using neural networks, MED BIO E C, 39(3), 2001, pp. 391-396
Citations number
15
Categorie Soggetti
Multidisciplinary,"Instrumentation & Measurement
Journal title
MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING
ISSN journal
01400118 → ACNP
Volume
39
Issue
3
Year of publication
2001
Pages
391 - 396
Database
ISI
SICI code
0140-0118(200105)39:3<391:AIOMSA>2.0.ZU;2-L
Abstract
The mitotic index (MI) is an important measure in cell proliferation studie s. Determination of the MI is usually made by light-microscope analysis of slide preparations. The analyst identifies and counts thousands of cells an d reports the percentage of mitotic shapes found among the interphase nucle i. Full automation of this process is an ambitious task, because there can exist very few mitotic shapes among hundreds of nuclei and thousands of art ifacts, resulting in a high probability of false positives, i.e. objects er roneously identified as mitosis or nuclei. A semiautomated approach for MI calculation is reported, based on the development of a neural network (NN) far automatic identification of metaphase spreads and stimulated nuclei in digital images of microscope preparations at 10X magnification. After segme ntation of the objects on each image, ten different morphometrical, photome trical and textural features are measured on each segmented object. An NN i s used to classify the feature vectors into three classes: metaphases, nucl ei and artifacts. The system has been able to classify correctly approximat ely 91% of the objects in each class, in a test set of 191 mitosis, 331 nuc lei and 387 artifacts, obtained from 30 different microscope slides, Manual editing of false positives from the metaphase classification results allow s the calculation of the MI with an error of 6.5%.