Thermally stable proteins are of interest for several reasons. They ca
n be used to improve the efficiency of many industrial processes and p
rovide insight into the general mechanisms of protein folding and stab
ilization. Comparison of tertiary structural properties of several pro
tein families with members of different thermostability should help to
delineate the role of individual factors in achieving stability at hi
gh temperature. In this work, 16 protein families with at least one kn
own thermophilic and one known mesophilic tertiary structure were exam
ined for the number and type of hydrogen bonds and salt links, polar s
urface composition, internal cavities and packing densities, and secon
dary structural composition. The results show a consistent increase in
the number of hydrogen bonds and in polar surface area fraction with
increased thermostability.