Ms. Fee et al., AUTOMATIC SORTING OF MULTIPLE-UNIT NEURONAL SIGNALS IN THE PRESENCE OF ANISOTROPIC AND NON-GAUSSIAN VARIABILITY, Journal of neuroscience methods, 69(2), 1996, pp. 175-188
Neuronal noise sources and systematic variability in the shape of a sp
ike limit the ability to sort multiple unit waveforms recorded from ne
rvous tissue into their single neuron constituents. Here we present a
procedure to efficiently sort spikes in the presence of noise that is
anisotropic, i.e., dominated by particular frequencies, and whose ampl
itude distribution may be non-Gaussian, such as occurs when spike wave
forms are a function of interspike interval. Our algorithm uses a hier
archical clustering scheme. First, multiple unit records are sorted in
to an overly large number of clusters by recursive bisection. Second,
these clusters are progressively aggregated into a minimal set of puta
tive single units based on both similarities of spike shape as well as
the statistics of spike arrival times, such as imposed by the refract
ory period. We apply the algorithm to waveforms recorded with chronica
lly implanted micro-wire stereotrodes from neocortex of behaving rat.
Natural extensions of the algorithm may be used to cluster spike wavef
orms from records with many input channels, such as those obtained wit
h tetrodes and multiple site optical techniques.