DEVELOPMENT OF 16S RIBOSOMAL-RNA OLIGONUCLEOTIDE PROBES FOR BREVIBACTERIUM, MICROCOCCUS ARTHROBACTER AND MICROBACTERIUM/AUREOBACTERIUM USEDIN DAIRY STARTER CULTURES/
B. Kolloffel et al., DEVELOPMENT OF 16S RIBOSOMAL-RNA OLIGONUCLEOTIDE PROBES FOR BREVIBACTERIUM, MICROCOCCUS ARTHROBACTER AND MICROBACTERIUM/AUREOBACTERIUM USEDIN DAIRY STARTER CULTURES/, Systematic and applied microbiology, 20(3), 1997, pp. 409-417
Oligonucleotide probes for bacteria of the cheese surface were develop
ed. The complete 16S rRNA nucleotide sequences available from databank
s of representatives of the genera Brevibacterium, Microbacterium/ Aur
eobacterium and Micrococcus/Arthrobacter were aligned. Oligonucleotide
probes were defined far the identification of these genera by selecti
ng a common sequence of their 16S rRNA genes which are different from
related genera like Corynebacterium, Propionibacterium or Bifidobacter
ium. 82 strains were tested of which 70 were of the high DNA G+C branc
h of bacterial evolution. II was shown by colony-hybridization experim
ents, that the selected oligonucleotide probes targeted to the 16S rDN
A region hybridized only with nucleic acids from strains of Brevibacte
rium, Microbacterium/Aureobacterium and Micrococcus/Arthrobacter, resp
ectively. For confirmation, a part of the 16S rDNA was amplified in vi
tro using the polymerase chain reaction technique with two specific ol
igonucleotides for each of these bacterial groups. The tested probes p
rovide a highly efficient tool to investigate and identify these gener
a within the coryneform group of bacteria. They were especially develo
ped for analyzing the composition of the microflora of the cheese surf
ace. The use of them may contribute substantially to the isolation and
study of new strains of the these genera from natural habitats like c
heese.