IDENTIFICATION OF THE GENUS ARMILLARIA BY SPECIFIC AMPLIFICATION OF AN RDNA-ITS FRAGMENT AND EVALUATION OF GENETIC-VARIATION WITHIN A-OSTOYAE BY RDNA-RFLP AND RAPD ANALYSIS
S. Schulze et al., IDENTIFICATION OF THE GENUS ARMILLARIA BY SPECIFIC AMPLIFICATION OF AN RDNA-ITS FRAGMENT AND EVALUATION OF GENETIC-VARIATION WITHIN A-OSTOYAE BY RDNA-RFLP AND RAPD ANALYSIS, European journal of forest pathology, 27(4), 1997, pp. 225-239
Genetic variation among Armillaria ostoyae isolates was studied by rDN
A-restriction fragment length polymorphism (RFLP) and random amplified
polymorphic DNA (RAPD) analysis. A total of 20 A. ostoyae isolates, m
ainly obtained from Picea spp. of different geographical origins, were
examined. Southern hybridization of whole-cell DNAs digested with Ava
II and probed with biotin-labelled cloned rDNA from Saccharomyces carl
sbergensis allowed :he differentiation of five RFLP groups. UPGMA clus
ter analysis of RAPD profiles (138 scorable bands) generated by 10 dec
amer primers (OPA 01-OPA 10) grouped the isolates in subclusters at si
milarity levels between 40% and 96%, indicating high intraspecific gen
etic variability. Some isolates of different geographical origins subg
rouped together, suggesting that similar mutational events have occurr
ed independently and that genetic exchange and recombination occurs am
ong the DNAs in natural populations. The potential role of historical
and current spread of spruce plants on the genetic variation of A. ost
oyae isolates in Europe is discussed. Using the primer pair ARM-1 and
ARM-2, an Armillaria-specific ITS-DNA fragment of about 660 bp was obt
ained. No intraspecific RFLP of this amplicon could be revealed, indic
ating low genetic variability of this region. The established informat
ive RFLP and RAPD markers and also the Armillaria-specific ITS-DNA fra
gment may be powerful tools for further epidemiological, phylogenetic
and host-pathogen interaction studies with A. ostoyae.