GENETIC DIVERSITY AMONG A COMPLEX OF CEREAL CYST NEMATODES INFERRED FROM RFLP ANALYSIS OF THE RIBOSOMAL INTERNAL TRANSCRIBED SPACER REGION

Citation
S. Bekal et al., GENETIC DIVERSITY AMONG A COMPLEX OF CEREAL CYST NEMATODES INFERRED FROM RFLP ANALYSIS OF THE RIBOSOMAL INTERNAL TRANSCRIBED SPACER REGION, Genome, 40(4), 1997, pp. 479-486
Citations number
36
Categorie Soggetti
Genetics & Heredity
Journal title
GenomeACNP
ISSN journal
08312796
Volume
40
Issue
4
Year of publication
1997
Pages
479 - 486
Database
ISI
SICI code
0831-2796(1997)40:4<479:GDAACO>2.0.ZU;2-Z
Abstract
This study examined the restriction polymorphism (RFLP) of the nuclear ribosomal DNA in Heterodera avenae, H. filipjevi, H. mani, H. latipon s, and the taxonomically unclear Gotland strain in order to establish a molecular characterization and phylogenetic relationships in the com plex of cereal cyst nematodes (CCN). The internal transcribed spacer ( ITS) and 5.8S rDNA were amplified by PCR from a single female or a cys t of 27 different geographic isolates of the CCN complex and one popul ation of H. schachtii, used as outgroup. The amplified product was 1.2 kb long and 14 of 15 enzymes produced restriction fragments for each isolate. Relationships between populations were determined from UPGMA analysis based on distance values calculated from RFLP data. Digestion s with TaqI clearly differentiated H. avenae, H. latipons, and a group composed of H.filipjevi and the Gotland strain. Six endonucleases (Ha eIII, HinfI, ItaI, PstI, TaqI, and Tru9I) produced the same restrictio n pattern with H. filipjevi and the Gotland strain, and both were clea rly separated from H. avenae with PstI. Restriction sites have reveale d a mixture of the species H. latipons and H. avenae, and possible inf raspecific variation in H. avenae. The inferred phylogenetic relations hips of species in the CCN complex are in agreement with their morphol ogical characterization.