Background In-vitro research has suggested that bacterial vaginosis ma
y increase the survival of HIV-1 in the genital tract. Therefore, we i
nvestigated the association of HIV-1 infection with vaginal flora abno
rmalities, including bacterial vaginosis and depletion of lactobacilli
, after adjustment for sexual activity and the presence of other sexua
lly transmitted diseases(STDs). Methods During the initial survey roun
d of our community-based trial of STD control for HIV-1 prevention in
rural Rakai District, southwestern Uganda, we selected 4718 women aged
15-59 years. They provided interview information, blood for HIV-1 and
syphilis serology, urine for detection of Chlamydia trachomatis and N
eisseria gonorrhoeae, and two self-administered vaginal swabs for cult
ure of Trichomonas vaginalis and gram-stain detection of vaginal flora
, classified by standardised, quantitative, morphological scoring. Sco
res 0-3 were normal vaginal flora (predominant lactobacilli). Higher s
cores suggested replacement of lactobacilli by gram-negative, anaerobi
c microorganisms (4-6 intermediate; 7-8 and 9-10 moderate and severe b
acterial vaginosis). Findings HIV-1 frequency was 14.2% among women wi
th normal vaginal flora and 26.7% among those with severe bacterial va
ginosis (p<0.001). We found an association between bacterial vaginosis
and increased HIV-1 infection among younger women, but not among wome
n older than 40 years; the association could not be explained by diffe
rences in sexual activity or concurrent infection with other STDs. The
frequency of bacterial vaginosis was similar among HIV-l-infected wom
en with symptoms (55.0%) and without symptoms (55.7%). The adjusted od
ds ratio of HIV-1 infection associated with any vaginal flora abnormal
ity (scores 4-10) was 1.52 (95% CI 1.22-1.90), for moderate bacterial
vagniosis (scores 7-8) it was 1.50 (1.18-1.89), and for severe bacteri
al vaginosis (scores 9-10) it was 2.08 (1.48-2.94). Interpretation Thi
s cross-sectional study cannot show whether disturbed vaginal flora in
creases susceptibility to HIV-1 infection. Nevertheless, the increased
frequency of HIV-1 associated with abnormal flora among younger women
, for whom HIV-1 acquisition is likely to be recent, but not among old
er women, in whom HIV-1 is likely to have been acquired earlier, sugge
sts that loss of lactobacilli or presence of bacterial vaginosis may i
ncrease susceptibility to HIV-1 acquisition. If this inference is corr
ect, control of bacterial vaginosis could reduce HIV-1 transmission.