B. Coxon et al., INVESTIGATION BY NMR-SPECTROSCOPY AND MOLECULAR MODELING OF THE CONFORMATIONS OF SOME MODIFIED DISACCHARIDE ANTIGENS FOR SHIGELLA-DYSENTERIAE TYPE-1, Journal of carbohydrate chemistry, 16(6), 1997, pp. 927-946
The O-polysaccharide of Shigella dysenteriae type 1 is made up of mult
iple repeats of the linear tetrasaccharide 1-->3)-alpha-D-GlcpNAc-(1--
>3)-alpha-L-Rhap-(1-->, for which the antigenic determinant for a muri
ne monoclonal IgM antibody is the disaccharide alpha-L-Rhap-(1-->2)-al
pha-D-Galp. This disaccharide and various analogs have been studied by
2D NOESY, POESY, and TOCSY NMR spectroscopy, in conjunction with prot
on spin-lattice relaxation rate measurements, restrained molecular mec
hanics, and restrained molecular dynamics with simulated annealing. It
has been found that replacement of any single hydroxyl group in the d
eterminant by a hydrogen atom, or replacement of any single hydroxyl g
roup in the Gal residue by a fluorine atom has little if any influence
on the conformation of the resulting derivatives.