Matrix metalloproteinases (MMPs) are zinc endopeptidases that are requ
ired for the degradation of extracellular matrix components during nor
mal embryo development, morphogenesis and tissue remodelling(1). Their
proteolytic activities are precisely regulated by endogenous tissue i
nhibitors of metalloproteinases (TIMPs)(1-5). Disruption of this balan
ce results in diseases such as arthritis, atherosclerosis, tumour grow
th and metastasis(1,2). Here we report the crystal structure of an MMP
-TIMP complex formed between the catalytic domain of human stromelysin
-1 (MMP-3) and human TIMP-1. TIMP-1, a 184-residue protein(5), has the
shape of an elongated, contiguous wedge. With its long edge, consisti
ng of five different chain regions, it occupies the entire length of t
he active-site cleft of MMP-3. The central disulphide-linked segments
Cys 1-Thr 2-Cys 3-Val 4 and Ser 68-Val 69 bind to either side of the c
atalytic zinc. Cys 1 bidentally coordinates this zinc, and the Thr-2 s
ide chain extends into the large specificity pocket of MMP-3. This unu
sual architecture of the interface between MMP-3 and TIMP-1 suggests n
ew possibilities for designing TIMP variants and synthetic MMP inhibit
ors with potential therapeutic applications.