Aa. Raibekas et V. Massey, GLYCEROL-ASSISTED RESTORATIVE ADJUSTMENT OF FLAVOENZYME CONFORMATION PERTURBED BY SITE-DIRECTED MUTAGENESIS, The Journal of biological chemistry, 272(35), 1997, pp. 22248-22252
The replacement of histidine 307 with leucine in pig kidney D amino ac
id oxidase perturbs its active site conformation accompanied by dramat
ic losses in protein-flavin interactions and enzymatic activity. Howev
er, the negative effect of this mutation on the holoenzyme structure i
s essentially eliminated in the presence of glycerol, resulting in up
to 50% activity recovery and greater than 16-fold increase in the flav
in affinity. Further analysis revealed that glycerol assists in the re
arrangement of the protein toward its holoenzyme-like conformation tog
ether with reduction in the solvent-accessible protein hydrophobic are
a as demonstrated by limited proteolysis and use of affinity and hydro
phobic probes. A substantial decrease in the protein-flavin interactio
ns was demonstrated at a low temperature, but this reversible process
was completely blocked in the presence of 40% glycerol. We suggest tha
t the perturbation of the D-amino acid oxidase active site is due to t
he nonpolar nature of the mutation whose negative impact on the holoen
zyme structure can be overcome by glycerol-induced strengthening of pr
otein internal hydrophobic interactions.