J. Bereiterhahn et al., SUPRAMOLECULAR ASSOCIATIONS WITH THE CYTOMATRIX AND THEIR RELEVANCE IN METABOLIC CONTROL - PROTEIN-SYNTHESIS AND GLYCOLYSIS, Zoology, 100(1-2), 1997, pp. 1-24
Cytoplasm is structured by supramolecular associations between cytoske
letal elements, metabolites, ions, and enzymes. Since the molecules ar
e not distributed homogenously, whole cell concentrations have little
meaning, and high local concentrations may be reached in cells showing
overall low contents. Biochemical reactions in living cells differ fr
om those in the test tube by high protein concentrations and low overa
ll substrate concentrations. The high molecular density (crowding) of
cytoplasm influences macromolecular associations which may form the ba
sis for metabolite channeling. This is discussed in relation to (i) th
e function-structure relationship of the translational apparatus and i
ts binding to the cytomatrix, and (ii) the physiological significance
of the association of glycolytic enzymes to actin and microtubules. Th
us, glycolytic enzymes and factors involved in the control of transcri
ption and translation may exert catalytic functions and may be involve
d in the generation of subcellular structures. Both these activities a
re supposed to be related reciprocally with each other. Several factor
s located in the cytoplasm and in the nucleus as well seem to particip
ate in a complicated network controlling differentiation and growth. C
onsequently, a new understanding of the dynamic structure of cytoplasm
has emerged, emphasising the continuity from single molecules to the
whole organism by weak bond interactions which are essential system pr
operties of organisms, overruling a strict reductionistic mode of desc
ription. For further precision of this view, biochemical experimentati
on has to be extended to studies of living cells using physicochemical
approaches which allow the monitoring of transient activity changes a
nd supramolecular associations.