A COMPARISON OF METHODS OF PHENOTYPIC AND GENOTYPIC FINGERPRINTING OFEXOPHIALA-DERMATITIDIS ISOLATED FROM SPUTUM SAMPLES OF PATIENTS WITH CYSTIC-FIBROSIS
Pm. Rath et al., A COMPARISON OF METHODS OF PHENOTYPIC AND GENOTYPIC FINGERPRINTING OFEXOPHIALA-DERMATITIDIS ISOLATED FROM SPUTUM SAMPLES OF PATIENTS WITH CYSTIC-FIBROSIS, Journal of Medical Microbiology, 46(9), 1997, pp. 757-762
Phenotypic and genotypic characteristics of 11 strains of Exophiala de
rmatitidis were investigated, Ten strains (including three reference s
trains) were isolated from sputum samples of six patients with cystic
fibrosis (CF) in Germany, and one reference strain was isolated from a
patient with phaeohyphomycosis in Japan, The strains showed differenc
es in their ability to assimilate sorbitol, palatinose, rhamnose, gluc
onate and melezitose, leading to the differentiation of seven auxotype
s, The IC30 of amphotericin B, and ketoconazole and itraconazole, resp
ectively, indicated susceptibility, whereas the IC30 of fluconazole an
d 5-fluorocytosine indicated resistance in all strains, Protein patter
ns in SDS-PAGE revealed no major differences, The glycoconjugate patte
rns distinguished the Japanese strain from the other strains, Cluster
analysis of whole-cell fatty acid methyl ester (FAME) profiles with th
e Microbial Identification System (MIS) revealed two major clusters se
parating a reference strain and the Japanese strain from the other str
ains, Analysis of patterns resulting from random amplification of poly
morphic DNA (RAPD) with two arbitrary primers showed four genotypes, C
omparison of the results revealed no agreement between the different f
ingerprinting methods, except the separation of the Japanese strain fr
om the European CF strains, As the results of assimilation tests seem
to vary between different laboratories, the analysis of FAME profiles
and RAPD analysis are recommended for typing E. dermatitidis.