K. Sakai et al., COARSE-GRAIN PARALLEL COMPUTING FOR VERY LARGE-SCALE NEURAL SIMULATIONS IN THE NEXUS SIMULATION ENVIRONMENT, Computers in biology and medicine, 27(4), 1997, pp. 257-266
We describe a neural simulator designed for simulating very large scal
e models of cortical architectures. This simulator, NEXUS, uses coarse
-grain parallel computing by distributing computation and data onto mu
ltiple conventional workstations connected via a local area network. C
oarse-grain parallel computing offers natural advantages in simulating
functionally segregated neural processes. We partition a complete mod
el into modules with locally dense connections-a module may represent
a cortical area, column, layer, or functional entity. Asynchronous dat
a communications among workstations are established through the Networ
k File System, which, together with the implicit modularity, decreases
communications overhead, and increases overall performance. Coarse-gr
ain parallelism also benefits from the standardization of conventional
workstations and LAN, including portability between generations and v
endors. (C) 1997 Elsevier Science Ltd.