Theoretical methods are applied to study the local anaesthetics (LAs)
procaine, 2-chloroprocaine, tetracaine, benzocaine, DI-MAPA, procainam
ide, lidocaine, tocainide, mepivacaine, ropivacaine, bupivacaine, etid
ocaine, W36017, and prilocaine. The AM1 method is used to construct a
three-centre pharmacophore model for both ester and amide types of LAs
. This model consists of an amine nitrogen atom that is protonated to
a higher degree at physiological pH, a flat hydrophobic region of arom
atic ring, and an additional functional group containing oxygen with l
one electron pairs. Based on these ideas a model for the binding of th
e lidocaine at the transmembrane protein was constructed. Ab initio SC
F method was used to study two-component lidocaine receptor binding si
te composed of formate (Glu(-), Asp(-)) and protonated methylamine (Ly
s(+), Arg(+)). The binding of LAs to the receptor may be understood by
considering a two-step process of recognition and binding of LA to it
s receptor. Within this model the lidocaine cation is in the first ste
p recognized and bonded at the negatively charged part of the receptor
. In a subsequent step the interaction between the amide oxygen and ca
tionic amine group of membrane protein may follow.