Background: The continued identification of new mutations in the cysta
thionine beta-synthase (CBS) gene is important in correlating the geno
type/phenotype of patients with classic homocystinuria and in assessin
g whether heterozygosity of CBS deficiency is an important cause of mi
ld hyperhomocysteinemia, an independent risk factor for occlusive vasc
ular diseases. Methods and Results: Single-strand conformational polym
orphism and direct nucleotide sequencing were used to detect two novel
mutations in the CBS gene of three homocystinuric patients from two u
nrelated families, The first mutation, a G-to-A transition at nucleoti
de 1316 in exon 12, results in an amino acid substitution of arginine
by glutamine at codon 439. The second mutation is a G-to-A transition
at nucleotide 1109 in exon 10 and results in an amino acid substitutio
n of cysteine by tyrosine at codon 370: All three patients are apparen
tly compound heterozygotes, with one of the two novel mutations on one
allele and the T833C mutation on the other allele. Conclusions: The a
bsence of the G(1316)A and G(1109)A mutations in 216 control alleles d
emonstrates that these two novel mutations do not represent common pol
ymorphisms, but rather are responsible for the defective CBS enzyme ac
tivities encoded by one of the two alleles of the CBS gene in each of
the two families.