Jm. Krahn et al., COUPLED FORMATION OF AN AMIDOTRANSFERASE INTERDOMAIN AMMONIA CHANNEL AND A PHOSPHORIBOSYLTRANSFERASE ACTIVE-SITE, Biochemistry, 36(37), 1997, pp. 11061-11068
Activation of glutamine phosphoribosylpyrophosphate (PRPP) amidotransf
erase (GPATase) by binding of a PRPP substrate analog results in the f
ormation of a 20 Angstrom channel connecting the active site for gluta
mine hydrolysis in one domain with the PRPP site in a second domain. T
his solvent-inaccessible channel permits transfer of the NH3 intermedi
ate between the two active sites. Tunneling of NH3 may be a common mec
hanism for glutamine amidotransferase-catalyzed nitrogen transfer and
for coordination of catalysis at two distinct active sites in complex
enzymes. The 2.4 Angstrom crystal structure of the active conformer of
GPATase also provides the first description of an intact active site
for the phosphoribosyltransferase (PRTase) family of nucleotide synthe
sis and salvage enzymes. Chemical assistance to catalysis is provided
primarily by the substrate and secondarily by the enzyme in the propos
ed structure-based mechanism. Different catalytic and inhibitory modes
of divalent cation binding to the PRTase active site are revealed in
the active conformer of the enzyme and in a feedback-inhibited GMP com
plex.