Js. Buyer et Le. Drinkwater, COMPARISON OF SUBSTRATE UTILIZATION ASSAY AND FATTY-ACID ANALYSIS OF SOIL MICROBIAL COMMUNITIES, Journal of microbiological methods, 30(1), 1997, pp. 3-11
Two methods for the characterization of microbial communities in field
soil samples were compared. Experimental subplots were established in
the Farming Systems Trial at the Rodale Institute Research Center in
Kutztown, PA, USA. In the legume system, plots receiving green manure
(hairy vetch) were compared to those receiving corn stover and a small
amount of rye residue. In the conventional system, samples were colle
cted in plots where corn stover was incorporated. Carbon source utiliz
ation profiles were developed using Biolog plates, while total soil fa
tty acids were determined by fatty acid methyl ester analysis. Princip
al component analysis and canonical discriminate analysis were used to
analyze the data. The two methods gave similar but not identical resu
lts. Management history had more effect than specific crop residue, bu
t temporal effects were greater than treatment effects. Certain shifts
in microbial communities were detected by fatty acid analysis but not
by carbon utilization assay, suggesting that changes in microbial spe
cies composition occurred that were not accompanied by changes in micr
obial community function. (C) 1997 Elsevier Science B.V.