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Results: 1-12 |
Results: 12
A refined prediction method for gel retardation of DNA oligonucleotides from dinucleotide step parameters: Reconciliation of DNA bending models with crystal structure data
Authors: Liu, YX Beveridge, DL
Citation: Yx. Liu et Dl. Beveridge, A refined prediction method for gel retardation of DNA oligonucleotides from dinucleotide step parameters: Reconciliation of DNA bending models with crystal structure data, J BIO STRUC, 18(4), 2001, pp. 505-526
Molecular dynamics simulations of B '-DNA: Sequence effects on A-tract-induced bending and flexibility
Authors: McConnell, KJ Beveridge, DL
Citation: Kj. Mcconnell et Dl. Beveridge, Molecular dynamics simulations of B '-DNA: Sequence effects on A-tract-induced bending and flexibility, J MOL BIOL, 314(1), 2001, pp. 23-40
Molecular dynamics simulation reveals sequence-intrinsic and protein-induced geometrical features of the OL1 DNA operator
Authors: Kombo, DC McConnell, KJ Young, MA Beveridge, DL
Citation: Dc. Kombo et al., Molecular dynamics simulation reveals sequence-intrinsic and protein-induced geometrical features of the OL1 DNA operator, BIOPOLYMERS, 59(4), 2001, pp. 205-225
Molecular dynamics and thermodynamics of protein-RNA interactions: Mutation of a conserved aromatic residue modifies stacking interactions and structural adaptation in the U1A-stem loop 2 RNA complex
Authors: Blakaj, DM McConnell, KJ Beveridge, DL Baranger, AM
Citation: Dm. Blakaj et al., Molecular dynamics and thermodynamics of protein-RNA interactions: Mutation of a conserved aromatic residue modifies stacking interactions and structural adaptation in the U1A-stem loop 2 RNA complex, J AM CHEM S, 123(11), 2001, pp. 2548-2551
Nucleic acids: theory and computer simulation, Y2K
Authors: Beveridge, DL McConnell, KJ
Citation: Dl. Beveridge et Kj. Mcconnell, Nucleic acids: theory and computer simulation, Y2K, CURR OP STR, 10(2), 2000, pp. 182-196
Molecular dynamics simulation accurately predicts the experimentally-observed distributions of the (C, N, O) protein atoms around water molecules andsodium ions
Authors: Kombo, DC Young, MA Beveridge, DL
Citation: Dc. Kombo et al., Molecular dynamics simulation accurately predicts the experimentally-observed distributions of the (C, N, O) protein atoms around water molecules andsodium ions, PROTEINS, 39(3), 2000, pp. 212-215
DNA structure: What's in charge?
Authors: McConnell, KJ Beveridge, DL
Citation: Kj. Mcconnell et Dl. Beveridge, DNA structure: What's in charge?, J MOL BIOL, 304(5), 2000, pp. 803-820
One nanosecond molecular dynamics simulation of the N-terminal domain of the lambda repressor protein
Authors: Kombo, DC Young, MA Beveridge, DL
Citation: Dc. Kombo et al., One nanosecond molecular dynamics simulation of the N-terminal domain of the lambda repressor protein, BIOPOLYMERS, 53(7), 2000, pp. 596-605
Molecular dynamics studies of axis bending in d(G(5)-(GA(4)T(4)C)(2)-C-5) and d(G(5)-(GT(4)A(4)C)(2)-C-5): Effects of sequence polarity on DNA curvature
Authors: Sprous, D Young, MA Beveridge, DL
Citation: D. Sprous et al., Molecular dynamics studies of axis bending in d(G(5)-(GA(4)T(4)C)(2)-C-5) and d(G(5)-(GT(4)A(4)C)(2)-C-5): Effects of sequence polarity on DNA curvature, J MOL BIOL, 285(4), 1999, pp. 1623-1632
Free energy analysis of protein-DNA binding: The EcoRI endonuclease-DNA complex
Authors: Jayaram, B McConnell, KJ Dixit, SB Beveridge, DL
Citation: B. Jayaram et al., Free energy analysis of protein-DNA binding: The EcoRI endonuclease-DNA complex, J COMPUT PH, 151(1), 1999, pp. 333-357
Computational analysis of variants of the operator binding domain of the bacteriophage lambda repressor
Authors: Kombo, DC Ravishanker, G Rackovsky, S Beveridge, DL
Citation: Dc. Kombo et al., Computational analysis of variants of the operator binding domain of the bacteriophage lambda repressor, INT J QUANT, 75(3), 1999, pp. 313-325
Solvation free energy of biomacromolecules: Parameters for a modified generalized born model consistent with the AMBER force field
Authors: Jayaram, B Sprous, D Beveridge, DL
Citation: B. Jayaram et al., Solvation free energy of biomacromolecules: Parameters for a modified generalized born model consistent with the AMBER force field, J PHYS CH B, 102(47), 1998, pp. 9571-9576
Risultati: 1-12 |