CHARACTERIZATION OF LACTOBACILLUS-SAKE STRAINS ASSOCIATING WITH PRODUCTION OF ROPY SLIME BY RANDOMLY AMPLIFIED POLYMORPHIC DNA (RAPD) AND PULSED-FIELD GEL-ELECTROPHORESIS (PFGE) PATTERNS
J. Bjorkroth et al., CHARACTERIZATION OF LACTOBACILLUS-SAKE STRAINS ASSOCIATING WITH PRODUCTION OF ROPY SLIME BY RANDOMLY AMPLIFIED POLYMORPHIC DNA (RAPD) AND PULSED-FIELD GEL-ELECTROPHORESIS (PFGE) PATTERNS, International journal of food microbiology, 31(1-3), 1996, pp. 59-68
Randomly amplified polymorphic DNA (RAPD) patterns and pulsed-field ge
l electrophoresis (PFGE) patterns were used for the characterization o
f ropy slime-producing Lactobacillus sake strains. The two most reveal
ing commercially available primers (OPJ 12 and OPJ 16, Operon Inc. Ala
meda, USA) and two rare-cutting enzymes (AvrII and SmaI) were chosen f
rom a pretested lot for the typing of 69 ropy slime-producing strains,
7 non-ropy isolates and 4 non-ropy reference strains. Both RAPD and P
FGE patterns confirmed the group division established in previous stud
ies and provided new information concerning ropy slime-producing strai
ns. PFGE patterns were found to have the greatest discriminatory power
, revealing the genetic variation of the main group of ropy slime-prod
ucing L. sake strains and distinguishing all non-ropy strains from sli
me-producers.