Microtubules isolated from pig brains have been immobilized on an inor
ganic substrate for use in AFM studies. The method employs 4-aminobuty
ldimethylmethoxysilane and glutaraldehyde to activate a silicon wafer
for binding the biopolymer. The covalent bond ensures the positional s
tability of the tubules on the substrate, and allows reproducible scan
ning probe experiments. Microtubules have been imaged both by atomic f
orce and scanning tunneling microscopy, yielding results very similar
to electron microscopy. The average apparent height of the tubules is
smaller than observed with transmission electron microscopy (25 nm) an
d is smaller in buffer solution (10 nm) than in air (15 nm). The biopo
lymer surface is softer under buffer than in air. The highest resoluti
on was obtained with the tapping mode where surface features as small
as 10 nm in X and Y have been resolved. Gold-coated tubules bound on s
ilicon have been successfully imaged by STM, while images of uncertain
origin were generated for tubules deposited on graphite. It is shown
that artefacts imaged on a blank graphite surface can easily be confou
nded with collapsed tubules.