A digoxigenin-labelled RNA probe with a sensitivity of 800 50% tissue
culture infectious dose (TCID50) was used to detect Hepatitis A Virus
(HAV) in oysters. We studied the influence of extraction methodology o
n riboprobe detection. Oyster samples obtained by four methods of extr
action and extraction-concentration were spiked with HAV (CF53 strain)
. There was no correlation between protein concentration and turbidity
of samples, and anti-digoxigenin antibodies showed a non specific rea
ction. Background noise was independent of protein concentration and d
isappeared when HAV RNA isolation by phenol/chloroform extraction was
introduced, but HAV RNA could not be detected by this technique. In th
e presence of Acid Guanidinium Thiocyanate (AGT), RNA from HAV suspens
ion was detected following phenolic extraction with a detection thresh
old of 8. 10(4) TCID50 Of spotted virus. HAV detection in oyster extra
ct by a digoxigenin-labelled riboprobe appeared useful in shellfish vi
rology, at least for a primary screening of samples.